Publications

Journal Papers

• Deep Denoising of Raw Biomedical Knowledge Graph from COVID-19 Literature, LitCovid and Pubtator
  Chao Jiang, Victoria Ngo, Richard Chapman, Yue Yu, Hongfang Liu, Guoqian Jiang, Nansu Zong, Accepted by Journal of Medical Internet Research (Impact Factor 5.43)

• BETA: a comprehensive BEnchmark for computational drug TArget prediction
  Nansu Zong, Ning Li, Victoria Ngo, Andrew Wen, Yue Yu, Chao Jiang, Ming Huang, Sunyang Fu, Richard Weinshilboum, Guoqian Jiang, Lawrence Hunter, Hongfang Liu, Accepted by Briefings in Bioinformatics (Impact Factor 11.62)

• Privacy-preserving construction of generalized linear mixed model for biomedical computation
  Rui Zhu, Chao Jiang, Xiaofeng Wang, Shuang Wang, Hao Zheng, Haixu Tang, Bioinformatics, Volume 36, Issue Supplement_1, July 2020, Pages i128–i135

• A community effort to protect genomic data sharing, collaboration and outsourcing
  Wang, Shuang and Jiang, Xiaoqian and Tang, Haixu and Wang, Xiaofeng and Bu, Diyue and Carey, Knox and Dyke, Stephanie OM and Fox, Dov and Jiang, Chao and Lauter, Kristin and et al. npj Genomic Medicine 2 (1), 33, 2017

• Secure Multi-pArty Computation Grid LOgistic REgression (SMAC-GLORE)
  Haoyi Shi, Chao Jiang, Wenrui Dai, Xiaoqian Jiang, Yuzhe Tang, Lucila Ohno-Machado and Shuang Wang, BMC Medical informatics and Decision Making (BMC), 16(Suppl 3):89, 2016.

• Trends in biomedical informatics: automated topic analysis of JAMIA articles
  Dong Han, Shuang Wang, Chao Jiang, Xiaoqian Jiang, Hyeon-Eui Kim, Jimeng Sun, Lucila Ohno-Machado, J Am Med Inform Assoc (2015) 22 (6): 1153-1163.

Conference Papers

• Energy-efficient Management of Data Centers using a Renewable-aware Scheduler
  Xiaopu Peng, Tathagata Bhattacharya, Jianzhou Mao, Ting Cao, Chao Jiang and Xiao Qin, IEEE International Conference on Networking, Architecture, and Storage (NAS 2022)

• Camouflaged Poisoning Attack on Graph Neural Networks
  Chao Jiang, Yi He, Richard Chapman, Hongyi Wu, ACM International Conference on Multimedia Retrieval (ACM ICMR) (2022)

• Integrating Local Vertex/Edge Embedding via Deep Matrix Fusion and Siamese Multi-label Classification
  Yang Zhou, Chao Jiang, Zijie Zhang, Dejing Dou, Ruoming Jin, Pengwei Wang, IEEE International Conference on Big Data (IEEE Big Data) (2019): 1018-1027

• Density-aware Local Siamese Autoencoder Network Embedding with Autoencoder Graph Clustering
  Yang Zhou, Amnay Amimeur, Chao Jiang, Dejing Dou, Ruoming Jin, Pengwei Wang, IEEE International Conference on Big Data (IEEE Big Data) (2018): 1162-1167

• Density-Adaptive Local Edge Representation Learning with Generative Adversarial Network Multi-label Edge Classification
  Yang Zhou, Sixing Wu, Chao Jiang, Zijie Zhang, Dejing Dou, Ruoming Jin, Pengwei Wang, IEEE International Conference on Data Mining (ICDM) (2018): 1464-1469.

Posters

• Successfully Applying Lottery Ticket Hypothesis to Diffusion Model
  Chao Jiang, Bo Hui, Bohan Liu, Da Yan, NeurIPS (2023)

• Automatic Construction of Biomedical Knowledge Graph from Covid-19 Literature
  Chao Jiang, Richard Chapman, Victoria Ngo, Hongfang Liu, Guoqian Jiang, Nansu Zong, AMIA (2021)

• MALTASE: a Mobile AppLication To improve patients’ Access to their data Sharing preferencE
  C. Jiang, X. Jiang, S. Wang, D. Guijarro, E. Bell, I. Jang, G. Yun, M. Rahman, L. Ohno-Machado, H. Kim, AMIA (2017)

• Honoring Patient’s Data Sharing Preferences: Implementation Challenges
  E. Bell, D. Guijarro, I. Jang, W. Zhu, T. Bath, G. Yun, M. Rahman, C. Jiang, X. Jiang, L. Ohno-Machado, H. Kim, AMIA (2017)